Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 GPR32P1-201ENST00000601788 811 ntBASIC15.39■□□□□ 0.05
TREM2Q9NZC2 AC004263.2-201ENST00000617183 678 ntBASIC15.39■□□□□ 0.05
TREM2Q9NZC2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TREM2Q9NZC2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 IGHGP-201ENST00000390555 1178 ntBASIC15.38■□□□□ 0.05
TREM2Q9NZC2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 PRELID1P1-202ENST00000567272 903 ntBASIC15.38■□□□□ 0.05
TREM2Q9NZC2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 AP002414.4-201ENST00000589764 1148 ntBASIC15.38■□□□□ 0.05
TREM2Q9NZC2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 IGHV3-41-201ENST00000613121 348 ntBASIC15.38■□□□□ 0.05
TREM2Q9NZC2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 KRT18P1-202ENST00000452408 1331 ntBASIC15.38■□□□□ 0.05
TREM2Q9NZC2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TREM2Q9NZC2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 LINC00602-201ENST00000629776 2065 ntBASIC15.37■□□□□ 0.05
TREM2Q9NZC2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 CHCHD2P8-201ENST00000429873 447 ntBASIC15.37■□□□□ 0.05
TREM2Q9NZC2 AP002383.4-201ENST00000442518 975 ntBASIC15.37■□□□□ 0.05
TREM2Q9NZC2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.37■□□□□ 0.05
TREM2Q9NZC2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms