Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1R1Q9NWW0 NCF1C-201ENST00000438382 1427 ntBASIC18.39■□□□□ 0.53
HCFC1R1Q9NWW0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1R1Q9NWW0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.39■□□□□ 0.53
HCFC1R1Q9NWW0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1R1Q9NWW0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.39■□□□□ 0.53
HCFC1R1Q9NWW0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 CRYGEP-201ENST00000412192 528 ntBASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
HCFC1R1Q9NWW0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 RPS15P9-201ENST00000494093 319 ntBASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 AC004790.2-201ENST00000623588 572 ntBASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 AC018445.3-201ENST00000624177 1945 ntBASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1R1Q9NWW0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AC003669.1-201ENST00000334569 611 ntBASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 HMGN1P19-201ENST00000436976 333 ntBASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 SIGLEC30P-201ENST00000455569 941 ntBASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 ALG1L5P-201ENST00000482043 771 ntBASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AC027796.2-201ENST00000575326 344 ntBASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 AC079781.4-201ENST00000641908 219 ntBASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HCFC1R1Q9NWW0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms