Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 COX5BP2-201ENST00000392354 334 ntBASIC17.72■□□□□ 0.43
TREX1Q9NSU2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 FAM210CP-201ENST00000445714 574 ntBASIC17.72■□□□□ 0.43
TREX1Q9NSU2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 KRT8P26-201ENST00000534154 1276 ntBASIC17.72■□□□□ 0.43
TREX1Q9NSU2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 AL049597.2-201ENST00000565575 961 ntBASIC17.72■□□□□ 0.43
TREX1Q9NSU2 AC090616.6-201ENST00000582640 721 ntBASIC17.72■□□□□ 0.43
TREX1Q9NSU2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.72■□□□□ 0.43
TREX1Q9NSU2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 AC005332.1-201ENST00000577698 1310 ntBASIC17.72■□□□□ 0.43
TREX1Q9NSU2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 FAM86EP-206ENST00000510506 987 ntBASIC17.71■□□□□ 0.43
TREX1Q9NSU2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 NTF6B-201ENST00000591913 560 ntBASIC17.71■□□□□ 0.43
TREX1Q9NSU2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TREX1Q9NSU2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 LYSMD4-203ENST00000378904 2122 ntBASIC17.7■□□□□ 0.42
TREX1Q9NSU2 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AC005336.2-201ENST00000593183 939 ntBASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AC124864.1-201ENST00000623408 392 ntBASIC17.7■□□□□ 0.42
TREX1Q9NSU2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AC125634.1-201ENST00000438758 1403 ntBASIC17.7■□□□□ 0.42
TREX1Q9NSU2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TREX1Q9NSU2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms