Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 AC007613.1-201ENST00000572811 2597 ntBASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 NUS1P1-201ENST00000446295 882 ntBASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 AC096582.2-201ENST00000510860 516 ntBASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 AC138894.3-201ENST00000603787 634 ntBASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 AC009949.1-201ENST00000623048 1830 ntBASIC16.73■□□□□ 0.27
PRTFDC1Q9NRG1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 POM121L3P-201ENST00000419331 1163 ntBASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 DDX43P3-201ENST00000441064 443 ntBASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 FOSL1P1-201ENST00000511041 816 ntBASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 BNIP3P18-201ENST00000593976 575 ntBASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 AC012313.10-201ENST00000623509 926 ntBASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRTFDC1Q9NRG1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 RNF165-205ENST00000588679 2904 ntBASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 NUS1P2-201ENST00000417358 873 ntBASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.71■□□□□ 0.27
PRTFDC1Q9NRG1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRTFDC1Q9NRG1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRTFDC1Q9NRG1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRTFDC1Q9NRG1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms