Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 AC018695.7-201ENST00000624587 2492 ntBASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 BX276092.7-203ENST00000637198 1536 ntBASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 PCDHA14-201ENST00000506751 2298 ntBASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 MIR718-201ENST00000390190 70 ntBASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 AC112698.1-201ENST00000510299 916 ntBASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 AC009154.2-201ENST00000621177 724 ntBASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC52A3Q9NQ40 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 SNORA78-201ENST00000459373 127 ntBASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 GCSHP2-201ENST00000560971 527 ntBASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 AC004263.2-201ENST00000617183 678 ntBASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC52A3Q9NQ40 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms