Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 CROCCP2-202ENST00000412962 2773 ntBASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NLRC4Q9NPP4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 AL023806.1-201ENST00000603994 1649 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 KRT89P-201ENST00000620027 1478 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 AL137013.1-201ENST00000432946 1228 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 KRT18P65-201ENST00000439811 1286 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 AC092597.1-201ENST00000487352 616 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 AC005363.2-201ENST00000618631 242 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 AL031432.5-201ENST00000641059 760 ntBASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NLRC4Q9NPP4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 TERF1P1-201ENST00000311003 1181 ntBASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 AC113347.1-201ENST00000413321 391 ntBASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 YBX1P2-201ENST00000489612 999 ntBASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 AC012306.2-201ENST00000609350 630 ntBASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 AC116407.2-201ENST00000613639 860 ntBASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.28■□□□□ 0.68
NLRC4Q9NPP4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 HLA-F-220ENST00000434407 884 ntBASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 KRT18P48-201ENST00000434763 852 ntBASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 AC073912.3-201ENST00000624414 853 ntBASIC19.27■□□□□ 0.68
NLRC4Q9NPP4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms