Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 AC139887.4-201ENST00000607877 719 ntBASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 AC011558.1-201ENST00000623459 338 ntBASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEUROD4Q9HD90 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 AL138688.1-201ENST00000624851 1594 ntBASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 AC117947.1-201ENST00000427448 529 ntBASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 UPK3BP1-201ENST00000428678 509 ntBASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 LINC00304-203ENST00000565008 1864 ntBASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 AC009949.1-201ENST00000623048 1830 ntBASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 HLA-J-201ENST00000462773 1622 ntBASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEUROD4Q9HD90 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 AK4P3-201ENST00000418260 669 ntBASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 TSPY12P-201ENST00000421279 868 ntBASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 AC004263.2-201ENST00000617183 678 ntBASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.8■□□□□ 0.28
NEUROD4Q9HD90 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms