Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 AL355312.1-201ENST00000407115 2176 ntBASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 MIR564-202ENST00000385049 94 ntBASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 KSR1P1-201ENST00000446298 240 ntBASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 UBALD1-205ENST00000590891 2641 ntBASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SND1-IT1Q9HBX3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 AC034236.2-201ENST00000606662 1610 ntBASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 FAM207BP-201ENST00000447172 505 ntBASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 RPS2P4-201ENST00000476944 856 ntBASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 AC142086.2-201ENST00000569753 217 ntBASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 CROCCP2-202ENST00000412962 2773 ntBASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 KRT8P50-201ENST00000562022 1438 ntBASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.94□□□□□ -0.5
SND1-IT1Q9HBX3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms