Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 Z83836.1-201ENST00000624605 1642 ntBASIC26.52■■□□□ 1.84
SCAF1Q9H7N4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
SCAF1Q9H7N4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 AC139887.3-201ENST00000568585 713 ntBASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 AC112497.1-201ENST00000624824 639 ntBASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC26.51■■□□□ 1.83
SCAF1Q9H7N4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 TBC1D3P2-202ENST00000577902 1649 ntBASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF1Q9H7N4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 LBH-203ENST00000404397 543 ntTSL 4 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 LBH-204ENST00000406087 559 ntTSL 4 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 MIR3687-2-201ENST00000577708 61 ntBASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 MIR3687-1-201ENST00000614492 61 ntBASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF1Q9H7N4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 MIR7706-201ENST00000613747 67 ntBASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 AL157888.1-201ENST00000631930 593 ntBASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF1Q9H7N4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms