Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 MIR4469-201ENST00000583919 79 ntBASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AC009949.1-201ENST00000623048 1830 ntBASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AC135776.1-201ENST00000319817 2481 ntBASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 YBX1P5-201ENST00000509441 847 ntBASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.97■□□□□ 0.95
TDRD3Q9H7E2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 WIZP1-201ENST00000531444 2299 ntBASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 KRT18P28-201ENST00000453838 1332 ntBASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TDRD3Q9H7E2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 PRSS29P-201ENST00000440800 595 ntBASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 STK19B-204ENST00000512515 211 ntBASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 STK25P1-201ENST00000585406 838 ntBASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TDRD3Q9H7E2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TDRD3Q9H7E2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TDRD3Q9H7E2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TDRD3Q9H7E2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.94■□□□□ 0.94
TDRD3Q9H7E2 AP000974.1-201ENST00000623909 2387 ntBASIC20.94■□□□□ 0.94
TDRD3Q9H7E2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms