Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM2Q9C040 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TRIM2Q9C040 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.39■□□□□ 0.21
TRIM2Q9C040 AC092647.4-201ENST00000457211 535 ntBASIC16.39■□□□□ 0.21
TRIM2Q9C040 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM2Q9C040 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM2Q9C040 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 SPDYE15P-201ENST00000424157 909 ntBASIC16.38■□□□□ 0.21
TRIM2Q9C040 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.38■□□□□ 0.21
TRIM2Q9C040 AC009154.2-201ENST00000621177 724 ntBASIC16.38■□□□□ 0.21
TRIM2Q9C040 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM2Q9C040 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM2Q9C040 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM2Q9C040 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM2Q9C040 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms