Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 AC090164.3-201ENST00000610780 2143 ntBASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 TP73-AS1-210ENST00000637775 1455 ntBASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 AL591684.3-201ENST00000605187 298 ntBASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 AL138831.2-201ENST00000606564 490 ntBASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 AC093677.2-201ENST00000600169 1863 ntBASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSBP3Q9BWW4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP3Q9BWW4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP3Q9BWW4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP3Q9BWW4 AC125634.1-201ENST00000438758 1403 ntBASIC14.83□□□□□ -0.03
SSBP3Q9BWW4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.83□□□□□ -0.03
SSBP3Q9BWW4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSBP3Q9BWW4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 AC135776.1-201ENST00000319817 2481 ntBASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 DUTP2-201ENST00000519164 463 ntBASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSBP3Q9BWW4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 AC135050.7-201ENST00000624508 2218 ntBASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 OR6D1P-202ENST00000641007 5290 ntBASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSBP3Q9BWW4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms