Protein–RNA interactions for Protein: Q9BVL2

NUP58, Nucleoporin p58/p45, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58Q9BVL2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP58Q9BVL2 AL121761.2-201ENST00000598007 1648 ntBASIC19.43■□□□□ 0.7
NUP58Q9BVL2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 PKD1P1-201ENST00000458669 6805 ntBASIC19.43■□□□□ 0.7
NUP58Q9BVL2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 AK4P3-201ENST00000418260 669 ntBASIC19.43■□□□□ 0.7
NUP58Q9BVL2 DDX43P3-201ENST00000441064 443 ntBASIC19.43■□□□□ 0.7
NUP58Q9BVL2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 LINC01238-205ENST00000567549 1107 ntBASIC19.43■□□□□ 0.7
NUP58Q9BVL2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
NUP58Q9BVL2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 AC012313.1-201ENST00000593393 3059 ntBASIC19.42■□□□□ 0.7
NUP58Q9BVL2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NUP58Q9BVL2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 AP000523.1-201ENST00000398242 1049 ntBASIC19.41■□□□□ 0.7
NUP58Q9BVL2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.41■□□□□ 0.7
NUP58Q9BVL2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP58Q9BVL2 AC009949.1-201ENST00000623048 1830 ntBASIC19.4■□□□□ 0.7
NUP58Q9BVL2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms