Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 ESPNP-201ENST00000270691 2015 ntBASIC16.99■□□□□ 0.31
CMKLR1Q99788 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CMKLR1Q99788 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.99■□□□□ 0.31
CMKLR1Q99788 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 AC096633.1-201ENST00000422446 749 ntBASIC16.98■□□□□ 0.31
CMKLR1Q99788 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 AC005104.2-201ENST00000427818 678 ntBASIC16.98■□□□□ 0.31
CMKLR1Q99788 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 AC122714.2-201ENST00000502787 707 ntBASIC16.98■□□□□ 0.31
CMKLR1Q99788 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 MIR1199-201ENST00000621445 119 ntBASIC16.98■□□□□ 0.31
CMKLR1Q99788 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 AC079776.2-201ENST00000641154 1609 ntBASIC16.98■□□□□ 0.31
CMKLR1Q99788 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.98■□□□□ 0.31
CMKLR1Q99788 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CMKLR1Q99788 AC132938.6-201ENST00000623828 1655 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 AC022898.2-201ENST00000616822 1312 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 AC092183.1-201ENST00000469884 875 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 RNA5SP416-201ENST00000516838 111 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 AC040169.1-201ENST00000565382 521 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 AC006557.2-201ENST00000592985 1240 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 PGM5P2-202ENST00000637225 1043 ntBASIC16.97■□□□□ 0.31
CMKLR1Q99788 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CMKLR1Q99788 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMKLR1Q99788 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms