Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.39■□□□□ 0.53
CDCA3Q99618 AC093512.1-201ENST00000617969 520 ntBASIC18.39■□□□□ 0.53
CDCA3Q99618 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDCA3Q99618 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.38■□□□□ 0.53
CDCA3Q99618 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.38■□□□□ 0.53
CDCA3Q99618 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDCA3Q99618 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CDCA3Q99618 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
CDCA3Q99618 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.38■□□□□ 0.53
CDCA3Q99618 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.38■□□□□ 0.53
CDCA3Q99618 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.38■□□□□ 0.53
CDCA3Q99618 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.38■□□□□ 0.53
CDCA3Q99618 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.38■□□□□ 0.53
CDCA3Q99618 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.38■□□□□ 0.53
CDCA3Q99618 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDCA3Q99618 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDCA3Q99618 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.38■□□□□ 0.53
CDCA3Q99618 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDCA3Q99618 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.38■□□□□ 0.53
CDCA3Q99618 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.38■□□□□ 0.53
CDCA3Q99618 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CDCA3Q99618 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CDCA3Q99618 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.37■□□□□ 0.53
CDCA3Q99618 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.37■□□□□ 0.53
CDCA3Q99618 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.37■□□□□ 0.53
CDCA3Q99618 AC092474.2-201ENST00000424288 719 ntBASIC18.37■□□□□ 0.53
CDCA3Q99618 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.37■□□□□ 0.53
CDCA3Q99618 PAWRP1-201ENST00000451083 565 ntBASIC18.37■□□□□ 0.53
CDCA3Q99618 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDCA3Q99618 AC023141.5-201ENST00000458585 616 ntBASIC18.37■□□□□ 0.53
CDCA3Q99618 AC002558.1-201ENST00000488906 803 ntBASIC18.37■□□□□ 0.53
CDCA3Q99618 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.37■□□□□ 0.53
CDCA3Q99618 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.37■□□□□ 0.53
CDCA3Q99618 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.37■□□□□ 0.53
CDCA3Q99618 PI4KAP1-204ENST00000612579 1703 ntBASIC18.37■□□□□ 0.53
CDCA3Q99618 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.37■□□□□ 0.53
CDCA3Q99618 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CDCA3Q99618 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CDCA3Q99618 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDCA3Q99618 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CDCA3Q99618 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.36■□□□□ 0.53
CDCA3Q99618 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDCA3Q99618 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.36■□□□□ 0.53
CDCA3Q99618 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDCA3Q99618 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CDCA3Q99618 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.36■□□□□ 0.53
CDCA3Q99618 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.36■□□□□ 0.53
CDCA3Q99618 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.36■□□□□ 0.53
CDCA3Q99618 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.36■□□□□ 0.53
CDCA3Q99618 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CDCA3Q99618 AC022145.2-201ENST00000598203 171 ntBASIC18.36■□□□□ 0.53
CDCA3Q99618 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.36■□□□□ 0.53
CDCA3Q99618 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.36■□□□□ 0.53
CDCA3Q99618 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.36■□□□□ 0.53
CDCA3Q99618 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDCA3Q99618 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDCA3Q99618 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.36■□□□□ 0.53
CDCA3Q99618 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CDCA3Q99618 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.35■□□□□ 0.53
CDCA3Q99618 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms