Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
PKP4Q99569 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PKP4Q99569 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.32■□□□□ 0.36
PKP4Q99569 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.32■□□□□ 0.36
PKP4Q99569 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.32■□□□□ 0.36
PKP4Q99569 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.32■□□□□ 0.36
PKP4Q99569 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PKP4Q99569 TPSP2-201ENST00000561760 610 ntBASIC17.32■□□□□ 0.36
PKP4Q99569 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.32■□□□□ 0.36
PKP4Q99569 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.32■□□□□ 0.36
PKP4Q99569 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PKP4Q99569 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PKP4Q99569 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.32■□□□□ 0.36
PKP4Q99569 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
PKP4Q99569 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PKP4Q99569 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
PKP4Q99569 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PKP4Q99569 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP4Q99569 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP4Q99569 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.31■□□□□ 0.36
PKP4Q99569 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.31■□□□□ 0.36
PKP4Q99569 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.31■□□□□ 0.36
PKP4Q99569 DRAXINP1-201ENST00000437611 948 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 DDX43P3-201ENST00000441064 443 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.31■□□□□ 0.36
PKP4Q99569 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.31■□□□□ 0.36
PKP4Q99569 MIR3180-1-201ENST00000580374 94 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 MIR3180-3-201ENST00000584616 94 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 AC005336.2-201ENST00000593183 939 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 NPAP1P7-201ENST00000613027 823 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 AC093458.2-201ENST00000623150 629 ntBASIC17.31■□□□□ 0.36
PKP4Q99569 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.31■□□□□ 0.36
PKP4Q99569 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PKP4Q99569 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PKP4Q99569 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.31■□□□□ 0.36
PKP4Q99569 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PKP4Q99569 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PKP4Q99569 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
PKP4Q99569 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
PKP4Q99569 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PKP4Q99569 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP4Q99569 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 AC096633.1-201ENST00000422446 749 ntBASIC17.3■□□□□ 0.36
PKP4Q99569 UPK3BP1-201ENST00000428678 509 ntBASIC17.3■□□□□ 0.36
PKP4Q99569 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP4Q99569 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP4Q99569 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.3■□□□□ 0.36
PKP4Q99569 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP4Q99569 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.3■□□□□ 0.36
PKP4Q99569 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PKP4Q99569 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.3■□□□□ 0.36
PKP4Q99569 AP005901.3-202ENST00000581653 237 ntBASIC17.3■□□□□ 0.36
PKP4Q99569 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP4Q99569 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PKP4Q99569 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP4Q99569 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
PKP4Q99569 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PKP4Q99569 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.29■□□□□ 0.36
PKP4Q99569 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PKP4Q99569 AC233702.3-201ENST00000578656 1387 ntBASIC17.29■□□□□ 0.36
PKP4Q99569 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms