Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 GUSBP6-202ENST00000438529 1198 ntBASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AL138781.1-201ENST00000566567 1274 ntBASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AC083880.1-201ENST00000608266 535 ntBASIC13.48□□□□□ -0.25
AP1S3Q96PC3 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 AC093677.2-201ENST00000600169 1863 ntBASIC13.48□□□□□ -0.25
AP1S3Q96PC3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 AL118508.1-201ENST00000613502 2345 ntBASIC13.47□□□□□ -0.25
AP1S3Q96PC3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 POU5F1P3-201ENST00000428824 1078 ntBASIC13.47□□□□□ -0.25
AP1S3Q96PC3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.47□□□□□ -0.25
AP1S3Q96PC3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 AL357033.4-201ENST00000617703 1807 ntBASIC13.47□□□□□ -0.25
AP1S3Q96PC3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 MIR193BHG-211ENST00000641433 5365 ntBASIC13.47□□□□□ -0.25
AP1S3Q96PC3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP1S3Q96PC3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms