Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 AC079781.3-201ENST00000449110 356 ntBASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 AC138932.1-201ENST00000534164 6830 ntBASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 REXO1L6P-202ENST00000619970 1078 ntBASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE1Q96MT3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 ABALON-201ENST00000629058 1903 ntBASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 AC096633.1-201ENST00000422446 749 ntBASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 AL031008.1-201ENST00000619963 541 ntBASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
PRICKLE1Q96MT3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 FAAHP1-202ENST00000446499 1238 ntBASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 LINC01711-201ENST00000598340 967 ntBASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE1Q96MT3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 AC097374.2-201ENST00000618617 1306 ntBASIC18.33■□□□□ 0.53
PRICKLE1Q96MT3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRICKLE1Q96MT3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.33■□□□□ 0.52
PRICKLE1Q96MT3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms