Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS3Q969F9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS3Q969F9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS3Q969F9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS3Q969F9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS3Q969F9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
HPS3Q969F9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 KRT8P26-201ENST00000534154 1276 ntBASIC19.7■□□□□ 0.74
HPS3Q969F9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS3Q969F9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS3Q969F9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
HPS3Q969F9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HPS3Q969F9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS3Q969F9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS3Q969F9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HPS3Q969F9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS3Q969F9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HPS3Q969F9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HPS3Q969F9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS3Q969F9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS3Q969F9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS3Q969F9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 MIR1224-201ENST00000408193 85 ntBASIC19.69■□□□□ 0.74
HPS3Q969F9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS3Q969F9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS3Q969F9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HPS3Q969F9 IGHV3-41-201ENST00000613121 348 ntBASIC19.69■□□□□ 0.74
HPS3Q969F9 AL358472.4-201ENST00000633140 710 ntBASIC19.69■□□□□ 0.74
HPS3Q969F9 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.69■□□□□ 0.74
HPS3Q969F9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
HPS3Q969F9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HPS3Q969F9 AC010460.3-201ENST00000511359 1579 ntBASIC19.69■□□□□ 0.74
HPS3Q969F9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS3Q969F9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS3Q969F9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS3Q969F9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS3Q969F9 AC108860.2-201ENST00000562760 2183 ntBASIC19.68■□□□□ 0.74
HPS3Q969F9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS3Q969F9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HPS3Q969F9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS3Q969F9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
HPS3Q969F9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS3Q969F9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS3Q969F9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HPS3Q969F9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS3Q969F9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.68■□□□□ 0.74
HPS3Q969F9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS3Q969F9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS3Q969F9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
HPS3Q969F9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 IER3-202ENST00000376377 1350 ntBASIC19.68■□□□□ 0.74
HPS3Q969F9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS3Q969F9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS3Q969F9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HPS3Q969F9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
HPS3Q969F9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS3Q969F9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS3Q969F9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS3Q969F9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS3Q969F9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS3Q969F9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS3Q969F9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HPS3Q969F9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS3Q969F9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HPS3Q969F9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS3Q969F9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS3Q969F9 GUSBP12-201ENST00000513727 720 ntBASIC19.67■□□□□ 0.74
HPS3Q969F9 AP005901.3-202ENST00000581653 237 ntBASIC19.67■□□□□ 0.74
HPS3Q969F9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms