Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP6NLQ92738 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.04■□□□□ 0.8
USP6NLQ92738 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6NLQ92738 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.04■□□□□ 0.8
USP6NLQ92738 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
USP6NLQ92738 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.04■□□□□ 0.8
USP6NLQ92738 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.04■□□□□ 0.8
USP6NLQ92738 AL031432.2-201ENST00000566714 459 ntBASIC20.04■□□□□ 0.8
USP6NLQ92738 AL928711.1-201ENST00000570165 459 ntBASIC20.04■□□□□ 0.8
USP6NLQ92738 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.04■□□□□ 0.8
USP6NLQ92738 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6NLQ92738 AC027612.4-201ENST00000605371 583 ntBASIC20.04■□□□□ 0.8
USP6NLQ92738 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6NLQ92738 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.04■□□□□ 0.8
USP6NLQ92738 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USP6NLQ92738 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.04■□□□□ 0.8
USP6NLQ92738 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.04■□□□□ 0.8
USP6NLQ92738 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP6NLQ92738 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
USP6NLQ92738 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6NLQ92738 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
USP6NLQ92738 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
USP6NLQ92738 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.03■□□□□ 0.8
USP6NLQ92738 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.03■□□□□ 0.8
USP6NLQ92738 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6NLQ92738 CEND1P1-201ENST00000451006 455 ntBASIC20.03■□□□□ 0.8
USP6NLQ92738 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.03■□□□□ 0.8
USP6NLQ92738 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.03■□□□□ 0.8
USP6NLQ92738 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.03■□□□□ 0.8
USP6NLQ92738 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
USP6NLQ92738 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.03■□□□□ 0.8
USP6NLQ92738 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
USP6NLQ92738 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 PHGDH-209ENST00000641074 1780 ntBASIC20.03■□□□□ 0.8
USP6NLQ92738 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6NLQ92738 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6NLQ92738 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6NLQ92738 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6NLQ92738 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
USP6NLQ92738 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.02■□□□□ 0.8
USP6NLQ92738 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6NLQ92738 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6NLQ92738 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6NLQ92738 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
USP6NLQ92738 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.02■□□□□ 0.8
USP6NLQ92738 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.02■□□□□ 0.8
USP6NLQ92738 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6NLQ92738 PDPK2P-202ENST00000562415 1191 ntBASIC20.02■□□□□ 0.8
USP6NLQ92738 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6NLQ92738 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6NLQ92738 AC019129.2-201ENST00000609837 1235 ntBASIC20.02■□□□□ 0.8
USP6NLQ92738 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.02■□□□□ 0.8
USP6NLQ92738 AL805961.1-202ENST00000641562 540 ntBASIC20.02■□□□□ 0.8
USP6NLQ92738 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
USP6NLQ92738 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6NLQ92738 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6NLQ92738 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
USP6NLQ92738 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP6NLQ92738 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
USP6NLQ92738 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP6NLQ92738 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.02■□□□□ 0.79
USP6NLQ92738 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.02■□□□□ 0.79
USP6NLQ92738 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.02■□□□□ 0.79
USP6NLQ92738 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
USP6NLQ92738 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6NLQ92738 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6NLQ92738 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6NLQ92738 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6NLQ92738 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
USP6NLQ92738 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.01■□□□□ 0.79
USP6NLQ92738 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.01■□□□□ 0.79
USP6NLQ92738 SIGLEC30P-201ENST00000455569 941 ntBASIC20.01■□□□□ 0.79
USP6NLQ92738 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6NLQ92738 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6NLQ92738 OR7E47P-204ENST00000575924 449 ntBASIC20.01■□□□□ 0.79
USP6NLQ92738 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6NLQ92738 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6NLQ92738 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms