Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
GCN1Q92616 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
GCN1Q92616 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
GCN1Q92616 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.34■□□□□ 0.05
GCN1Q92616 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.34■□□□□ 0.05
GCN1Q92616 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.34■□□□□ 0.05
GCN1Q92616 AC007389.4-201ENST00000454674 793 ntBASIC15.34■□□□□ 0.05
GCN1Q92616 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.34■□□□□ 0.05
GCN1Q92616 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.34■□□□□ 0.05
GCN1Q92616 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GCN1Q92616 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.34■□□□□ 0.05
GCN1Q92616 AC079328.1-201ENST00000560358 952 ntBASIC15.34■□□□□ 0.05
GCN1Q92616 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GCN1Q92616 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.34■□□□□ 0.05
GCN1Q92616 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GCN1Q92616 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.34■□□□□ 0.05
GCN1Q92616 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GCN1Q92616 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
GCN1Q92616 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.34■□□□□ 0.05
GCN1Q92616 AC104989.1-201ENST00000519711 778 ntBASIC15.34■□□□□ 0.05
GCN1Q92616 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GCN1Q92616 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCN1Q92616 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.34■□□□□ 0.05
GCN1Q92616 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GCN1Q92616 HINT2P1-201ENST00000419438 481 ntBASIC15.33■□□□□ 0.05
GCN1Q92616 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.33■□□□□ 0.05
GCN1Q92616 AC011495.1-201ENST00000498085 584 ntBASIC15.33■□□□□ 0.05
GCN1Q92616 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.33■□□□□ 0.05
GCN1Q92616 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GCN1Q92616 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.33■□□□□ 0.04
GCN1Q92616 EP400NL-214ENST00000641289 2402 ntBASIC15.33■□□□□ 0.04
GCN1Q92616 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.33■□□□□ 0.04
GCN1Q92616 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GCN1Q92616 MTMR9LP-203ENST00000426597 1545 ntBASIC15.33■□□□□ 0.04
GCN1Q92616 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.33■□□□□ 0.04
GCN1Q92616 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.33■□□□□ 0.04
GCN1Q92616 MIR1908-201ENST00000410394 80 ntBASIC15.33■□□□□ 0.04
GCN1Q92616 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GCN1Q92616 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.33■□□□□ 0.04
GCN1Q92616 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.33■□□□□ 0.04
GCN1Q92616 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 SIRPAP1-201ENST00000448467 1770 ntBASIC15.33■□□□□ 0.04
GCN1Q92616 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.33■□□□□ 0.04
GCN1Q92616 AC233723.2-201ENST00000623798 2106 ntBASIC15.33■□□□□ 0.04
GCN1Q92616 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCN1Q92616 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GCN1Q92616 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.32■□□□□ 0.04
GCN1Q92616 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.32■□□□□ 0.04
GCN1Q92616 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.32■□□□□ 0.04
GCN1Q92616 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.32■□□□□ 0.04
GCN1Q92616 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.32■□□□□ 0.04
GCN1Q92616 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.32■□□□□ 0.04
GCN1Q92616 SPCS2P2-201ENST00000603270 608 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 AC015967.2-201ENST00000624092 234 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 AC006435.4-201ENST00000625037 234 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 AL356737.1-201ENST00000634391 234 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.32■□□□□ 0.04
GCN1Q92616 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
GCN1Q92616 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCN1Q92616 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.32■□□□□ 0.04
GCN1Q92616 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.32■□□□□ 0.04
GCN1Q92616 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
GCN1Q92616 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.32■□□□□ 0.04
GCN1Q92616 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
GCN1Q92616 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.32■□□□□ 0.04
GCN1Q92616 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.32■□□□□ 0.04
GCN1Q92616 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GCN1Q92616 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GCN1Q92616 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.32■□□□□ 0.04
GCN1Q92616 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms