Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.48■■□□□ 1.03
SNED1Q8TER0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SNED1Q8TER0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 HLA-J-203ENST00000494367 1087 ntBASIC21.47■■□□□ 1.03
SNED1Q8TER0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.47■■□□□ 1.03
SNED1Q8TER0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.47■■□□□ 1.03
SNED1Q8TER0 AC022145.2-201ENST00000598203 171 ntBASIC21.47■■□□□ 1.03
SNED1Q8TER0 AC105339.1-204ENST00000636249 355 ntBASIC21.47■■□□□ 1.03
SNED1Q8TER0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.47■■□□□ 1.03
SNED1Q8TER0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.47■■□□□ 1.03
SNED1Q8TER0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.47■■□□□ 1.03
SNED1Q8TER0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.47■■□□□ 1.03
SNED1Q8TER0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.47■■□□□ 1.03
SNED1Q8TER0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNED1Q8TER0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNED1Q8TER0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 COX20P2-201ENST00000452636 358 ntBASIC21.46■■□□□ 1.03
SNED1Q8TER0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 AC109322.1-201ENST00000524499 1264 ntBASIC21.46■■□□□ 1.03
SNED1Q8TER0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNED1Q8TER0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNED1Q8TER0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 PKD1P6-201ENST00000343738 4769 ntBASIC21.46■■□□□ 1.03
SNED1Q8TER0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNED1Q8TER0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNED1Q8TER0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNED1Q8TER0 AC074386.1-202ENST00000463561 864 ntBASIC21.46■■□□□ 1.03
SNED1Q8TER0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 AC093512.1-201ENST00000617969 520 ntBASIC21.46■■□□□ 1.03
SNED1Q8TER0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SNED1Q8TER0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNED1Q8TER0 AC009336.1-201ENST00000608941 1553 ntBASIC21.45■■□□□ 1.03
SNED1Q8TER0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNED1Q8TER0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SNED1Q8TER0 AC098818.2-201ENST00000564925 2320 ntBASIC21.44■■□□□ 1.02
SNED1Q8TER0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNED1Q8TER0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNED1Q8TER0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNED1Q8TER0 PAWRP1-201ENST00000451083 565 ntBASIC21.44■■□□□ 1.02
SNED1Q8TER0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 AL390955.2-201ENST00000603032 514 ntBASIC21.44■■□□□ 1.02
SNED1Q8TER0 AC068137.2-201ENST00000605408 478 ntBASIC21.44■■□□□ 1.02
SNED1Q8TER0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNED1Q8TER0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SNED1Q8TER0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNED1Q8TER0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNED1Q8TER0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SNED1Q8TER0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms