Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 BX005266.1-201ENST00000473402 457 ntBASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 MIR7706-201ENST00000613747 67 ntBASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 AP000347.1-202ENST00000435868 847 ntBASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 AC002558.1-201ENST00000488906 803 ntBASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 BX640515.1-201ENST00000617215 977 ntBASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 AL022326.1-202ENST00000641533 845 ntBASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.67■□□□□ 0.9
NEDD1Q8NHV4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 STK25P1-201ENST00000585406 838 ntBASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 AC004817.3-201ENST00000602957 2129 ntBASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.66■□□□□ 0.9
NEDD1Q8NHV4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 AC243591.1-201ENST00000452967 1364 ntBASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 AC003669.1-201ENST00000334569 611 ntBASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 AL020989.1-201ENST00000422979 469 ntBASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 SLC25A6P5-201ENST00000435663 894 ntBASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 OR7E14P-202ENST00000530490 1290 ntBASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 REXO1L11P-201ENST00000620964 1927 ntBASIC20.65■□□□□ 0.9
NEDD1Q8NHV4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms