Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.67■□□□□ 0.26
NUP43Q8NFH3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NUP43Q8NFH3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AL049597.2-201ENST00000565575 961 ntBASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 AC133963.1-201ENST00000504166 1679 ntBASIC16.65■□□□□ 0.26
NUP43Q8NFH3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
NUP43Q8NFH3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
NUP43Q8NFH3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NUP43Q8NFH3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUP43Q8NFH3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms