Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 CHCHD2P8-201ENST00000429873 447 ntBASIC18.28■□□□□ 0.52
PAF1Q8N7H5 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 AC090616.6-201ENST00000582640 721 ntBASIC18.28■□□□□ 0.52
PAF1Q8N7H5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PAF1Q8N7H5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 PHGDH-209ENST00000641074 1780 ntBASIC18.27■□□□□ 0.52
PAF1Q8N7H5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 VENTXP7-201ENST00000475503 772 ntBASIC18.27■□□□□ 0.52
PAF1Q8N7H5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 AC124864.1-201ENST00000623408 392 ntBASIC18.27■□□□□ 0.52
PAF1Q8N7H5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PAF1Q8N7H5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PAF1Q8N7H5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.26■□□□□ 0.51
PAF1Q8N7H5 HCG4P8-203ENST00000443049 980 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms