Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 LINC01711-201ENST00000598340 967 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 AL031008.1-201ENST00000619963 541 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 AL355877.3-201ENST00000622820 899 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 AL353593.2-201ENST00000602529 1483 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.77■□□□□ 0.27
ARHGEF39Q8N4T4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ARHGEF39Q8N4T4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARHGEF39Q8N4T4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ARHGEF39Q8N4T4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARHGEF39Q8N4T4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AC103564.2-201ENST00000432853 1299 ntBASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 FGFR3P6-201ENST00000457012 610 ntBASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.76■□□□□ 0.27
ARHGEF39Q8N4T4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AL121912.1-201ENST00000603683 238 ntBASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARHGEF39Q8N4T4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 AC073592.4-201ENST00000623827 446 ntBASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 TP73-AS1-207ENST00000624167 988 ntBASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms