Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 HARS-201ENST00000307633 1780 ntTSL 2 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA6Q8N139 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA6Q8N139 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA6Q8N139 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ABCA6Q8N139 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.11■■□□□ 1.77
ABCA6Q8N139 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC26.1■■□□□ 1.77
ABCA6Q8N139 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC26.1■■□□□ 1.77
ABCA6Q8N139 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ABCA6Q8N139 AC126763.1-201ENST00000552015 2118 ntBASIC26.1■■□□□ 1.77
ABCA6Q8N139 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA6Q8N139 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC26.1■■□□□ 1.77
ABCA6Q8N139 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ABCA6Q8N139 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC26.1■■□□□ 1.77
ABCA6Q8N139 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC26.09■■□□□ 1.77
ABCA6Q8N139 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
ABCA6Q8N139 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
ABCA6Q8N139 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.09■■□□□ 1.77
ABCA6Q8N139 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.09■■□□□ 1.77
ABCA6Q8N139 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ABCA6Q8N139 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA6Q8N139 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA6Q8N139 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA6Q8N139 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA6Q8N139 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA6Q8N139 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA6Q8N139 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ABCA6Q8N139 AC087163.2-201ENST00000457299 853 ntBASIC26.08■■□□□ 1.77
ABCA6Q8N139 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 RPL28-209ENST00000560055 670 ntTSL 3 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
ABCA6Q8N139 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 CNN2P2-201ENST00000443536 909 ntBASIC26.07■■□□□ 1.76
ABCA6Q8N139 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 CNN2P3-201ENST00000450201 906 ntBASIC26.07■■□□□ 1.76
ABCA6Q8N139 MEIS3P1-201ENST00000495167 958 ntBASIC26.07■■□□□ 1.76
ABCA6Q8N139 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 AL136317.3-201ENST00000618497 906 ntBASIC26.07■■□□□ 1.76
ABCA6Q8N139 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.07■■□□□ 1.76
ABCA6Q8N139 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ABCA6Q8N139 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AL513480.1-201ENST00000451731 511 ntBASIC26.06■■□□□ 1.76
ABCA6Q8N139 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 AC116562.4-201ENST00000641316 2276 ntBASIC26.06■■□□□ 1.76
ABCA6Q8N139 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC26.06■■□□□ 1.76
ABCA6Q8N139 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA6Q8N139 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms