Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 AC148477.5-201ENST00000625164 1645 ntBASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 AC006504.4-201ENST00000592118 1568 ntBASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 AL049757.1-201ENST00000616842 1596 ntBASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 MCCD1P2-201ENST00000423228 335 ntBASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS3Q8IXF0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS3Q8IXF0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.33■□□□□ 0.53
NPAS3Q8IXF0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS3Q8IXF0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS3Q8IXF0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 AC211486.1-202ENST00000416371 468 ntBASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 AP006288.1-201ENST00000446065 395 ntBASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 AC211476.1-201ENST00000503899 468 ntBASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS3Q8IXF0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AC108073.2-201ENST00000464002 357 ntBASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AC073592.3-201ENST00000625118 1834 ntBASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS3Q8IXF0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 AC002310.6-201ENST00000624451 1377 ntBASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS3Q8IXF0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms