Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SCUBE3Q8IX30 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 NSUN5P1-202ENST00000421140 1535 ntBASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 NSUN5P2-203ENST00000457352 1529 ntBASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 AC096633.1-201ENST00000422446 749 ntBASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 MINOS1P3-201ENST00000457048 203 ntBASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 AC012615.1-201ENST00000565797 1299 ntBASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 AC010460.3-201ENST00000511359 1579 ntBASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCUBE3Q8IX30 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SCUBE3Q8IX30 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 BCL2-203ENST00000589955 5011 ntBASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 AC005332.8-201ENST00000622750 2735 ntBASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 AC104819.1-201ENST00000504587 486 ntBASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
SCUBE3Q8IX30 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 AC007967.3-201ENST00000434308 558 ntBASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCUBE3Q8IX30 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCUBE3Q8IX30 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCUBE3Q8IX30 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCUBE3Q8IX30 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms