Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 AL662844.4-201ENST00000606367 2838 ntBASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 AL121829.2-201ENST00000620908 328 ntBASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CROCCP3Q8IVE0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.14■□□□□ 0.18
CROCCP3Q8IVE0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CROCCP3Q8IVE0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CROCCP3Q8IVE0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CROCCP3Q8IVE0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.14■□□□□ 0.18
CROCCP3Q8IVE0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 AC034268.1-201ENST00000441047 882 ntBASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 AC093010.1-201ENST00000473625 1624 ntBASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CROCCP3Q8IVE0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 AC092384.3-202ENST00000564646 2873 ntBASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CROCCP3Q8IVE0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 KRT8P3-201ENST00000519669 1449 ntBASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CROCCP3Q8IVE0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms