Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL55Q7Z7F7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 CYP2D8P-201ENST00000433633 1490 ntBASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 AC022898.2-201ENST00000616822 1312 ntBASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SEC1P-202ENST00000473944 940 ntBASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 AC010947.1-201ENST00000623454 693 ntBASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL55Q7Z7F7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms