Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AIRN-201ENST00000601203 4374 ntBASIC20.83■□□□□ 0.93
USP50Q70EL3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP50Q70EL3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.83■□□□□ 0.93
USP50Q70EL3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.83■□□□□ 0.93
USP50Q70EL3 MIR943-201ENST00000401286 94 ntBASIC20.83■□□□□ 0.93
USP50Q70EL3 AL355306.1-201ENST00000415580 579 ntBASIC20.83■□□□□ 0.93
USP50Q70EL3 FAM207CP-201ENST00000443486 507 ntBASIC20.83■□□□□ 0.93
USP50Q70EL3 AL513480.1-201ENST00000451731 511 ntBASIC20.83■□□□□ 0.93
USP50Q70EL3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.83■□□□□ 0.93
USP50Q70EL3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.83■□□□□ 0.93
USP50Q70EL3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.83■□□□□ 0.92
USP50Q70EL3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.83■□□□□ 0.92
USP50Q70EL3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
USP50Q70EL3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP50Q70EL3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 TUBB3P1-201ENST00000405796 1332 ntBASIC20.82■□□□□ 0.92
USP50Q70EL3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.82■□□□□ 0.92
USP50Q70EL3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.82■□□□□ 0.92
USP50Q70EL3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.82■□□□□ 0.92
USP50Q70EL3 AL671277.1-201ENST00000429656 993 ntBASIC20.82■□□□□ 0.92
USP50Q70EL3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.82■□□□□ 0.92
USP50Q70EL3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.82■□□□□ 0.92
USP50Q70EL3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.82■□□□□ 0.92
USP50Q70EL3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP50Q70EL3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
USP50Q70EL3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
USP50Q70EL3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.81■□□□□ 0.92
USP50Q70EL3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
USP50Q70EL3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
USP50Q70EL3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
USP50Q70EL3 SPDYE11-202ENST00000450699 704 ntBASIC20.81■□□□□ 0.92
USP50Q70EL3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.81■□□□□ 0.92
USP50Q70EL3 KRT8P48-201ENST00000515599 1220 ntBASIC20.81■□□□□ 0.92
USP50Q70EL3 IGHV3-52-201ENST00000519770 353 ntBASIC20.81■□□□□ 0.92
USP50Q70EL3 SPDYE9P-201ENST00000570642 692 ntBASIC20.81■□□□□ 0.92
USP50Q70EL3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.81■□□□□ 0.92
USP50Q70EL3 SPDYE10P-202ENST00000612005 668 ntBASIC20.81■□□□□ 0.92
USP50Q70EL3 SPDYE8P-202ENST00000612377 668 ntBASIC20.81■□□□□ 0.92
USP50Q70EL3 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.81■□□□□ 0.92
USP50Q70EL3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.81■□□□□ 0.92
USP50Q70EL3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
USP50Q70EL3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
USP50Q70EL3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.81■□□□□ 0.92
USP50Q70EL3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP50Q70EL3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.8■□□□□ 0.92
USP50Q70EL3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.8■□□□□ 0.92
USP50Q70EL3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.8■□□□□ 0.92
USP50Q70EL3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.8■□□□□ 0.92
USP50Q70EL3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 KLF2P3-201ENST00000451977 1087 ntBASIC20.8■□□□□ 0.92
USP50Q70EL3 UGT1A2P-201ENST00000454886 866 ntBASIC20.8■□□□□ 0.92
USP50Q70EL3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.8■□□□□ 0.92
USP50Q70EL3 ACTL9-202ENST00000612068 1252 ntBASIC20.8■□□□□ 0.92
USP50Q70EL3 AP001059.3-201ENST00000619053 235 ntBASIC20.8■□□□□ 0.92
USP50Q70EL3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP50Q70EL3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.8■□□□□ 0.92
USP50Q70EL3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP50Q70EL3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.79■□□□□ 0.92
USP50Q70EL3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.79■□□□□ 0.92
USP50Q70EL3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.79■□□□□ 0.92
USP50Q70EL3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.79■□□□□ 0.92
USP50Q70EL3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP50Q70EL3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP50Q70EL3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
USP50Q70EL3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.79■□□□□ 0.92
USP50Q70EL3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP50Q70EL3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms