Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 REXO1L9P-201ENST00000604264 2108 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP31Q70CQ4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 AC027796.2-201ENST00000575326 344 ntBASIC23.65■■□□□ 1.38
USP31Q70CQ4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
USP31Q70CQ4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP31Q70CQ4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP31Q70CQ4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP31Q70CQ4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP31Q70CQ4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP31Q70CQ4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP31Q70CQ4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC23.64■■□□□ 1.37
USP31Q70CQ4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP31Q70CQ4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
USP31Q70CQ4 AC254562.1-201ENST00000417586 456 ntBASIC23.64■■□□□ 1.37
USP31Q70CQ4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP31Q70CQ4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC23.64■■□□□ 1.37
USP31Q70CQ4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
USP31Q70CQ4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.64■■□□□ 1.37
USP31Q70CQ4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 AL020996.1-203ENST00000536896 2307 ntBASIC23.63■■□□□ 1.37
USP31Q70CQ4 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP31Q70CQ4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP31Q70CQ4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP31Q70CQ4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
USP31Q70CQ4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
USP31Q70CQ4 GGTLC5P-201ENST00000617623 998 ntBASIC23.63■■□□□ 1.37
USP31Q70CQ4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP31Q70CQ4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP31Q70CQ4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
USP31Q70CQ4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP31Q70CQ4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP31Q70CQ4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 HTR5BP-201ENST00000430851 1154 ntBASIC23.62■■□□□ 1.37
USP31Q70CQ4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP31Q70CQ4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.62■■□□□ 1.37
USP31Q70CQ4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 FLJ13224-201ENST00000313737 1514 ntBASIC23.61■■□□□ 1.37
USP31Q70CQ4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 AL590787.1-201ENST00000568856 1315 ntBASIC23.61■■□□□ 1.37
USP31Q70CQ4 ELL2P1-201ENST00000413990 1906 ntBASIC23.61■■□□□ 1.37
USP31Q70CQ4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 KRT19P2-202ENST00000557173 1012 ntBASIC23.61■■□□□ 1.37
USP31Q70CQ4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP31Q70CQ4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC23.61■■□□□ 1.37
USP31Q70CQ4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
USP31Q70CQ4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms