Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 SIGLEC16-201ENST00000599858 1437 ntBASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 PRYP5-201ENST00000451909 266 ntBASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC126763.1-201ENST00000552015 2118 ntBASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 PMS2P7-201ENST00000506558 1336 ntBASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
C9orf139Q6ZV77 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 COX5BP2-201ENST00000392354 334 ntBASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 KRT18P13-201ENST00000400056 1290 ntBASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 AC105339.3-201ENST00000560043 636 ntBASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 AL022326.1-202ENST00000641533 845 ntBASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 AC010460.3-201ENST00000511359 1579 ntBASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 KRT8P47-201ENST00000604727 1398 ntBASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
C9orf139Q6ZV77 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C9orf139Q6ZV77 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms