Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
C11orf88Q6PI97 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.55■□□□□ 0.08
C11orf88Q6PI97 KRT16P1-201ENST00000399124 1418 ntBASIC15.55■□□□□ 0.08
C11orf88Q6PI97 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 AC026271.3-201ENST00000571884 352 ntBASIC15.55■□□□□ 0.08
C11orf88Q6PI97 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 AC012306.2-201ENST00000609350 630 ntBASIC15.55■□□□□ 0.08
C11orf88Q6PI97 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 TSPY26P-202ENST00000565928 3884 ntBASIC15.55■□□□□ 0.08
C11orf88Q6PI97 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
C11orf88Q6PI97 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 AC022211.2-201ENST00000585075 2527 ntBASIC15.54■□□□□ 0.08
C11orf88Q6PI97 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 MIR1224-201ENST00000408193 85 ntBASIC15.54■□□□□ 0.08
C11orf88Q6PI97 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 C1QL1P1-201ENST00000568105 661 ntBASIC15.54■□□□□ 0.08
C11orf88Q6PI97 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 AL023806.1-201ENST00000603994 1649 ntBASIC15.54■□□□□ 0.08
C11orf88Q6PI97 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C11orf88Q6PI97 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.53■□□□□ 0.08
C11orf88Q6PI97 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 AL118508.1-201ENST00000613502 2345 ntBASIC15.53■□□□□ 0.08
C11orf88Q6PI97 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms