Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 AC243591.1-201ENST00000452967 1364 ntBASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 AL022326.1-202ENST00000641533 845 ntBASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC27A1Q6PCB7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC27A1Q6PCB7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 AC132938.5-201ENST00000624980 1813 ntBASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 PRYP5-201ENST00000451909 266 ntBASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 AC109462.3-201ENST00000573934 613 ntBASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 AC107918.4-202ENST00000641623 219 ntBASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 HLA-J-201ENST00000462773 1622 ntBASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC27A1Q6PCB7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 AC020763.4-201ENST00000623414 4170 ntBASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 AL020989.1-201ENST00000422979 469 ntBASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC27A1Q6PCB7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms