Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC246785.2-201ENST00000432512 513 ntBASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AP002383.4-201ENST00000442518 975 ntBASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 TPSP2-201ENST00000561760 610 ntBASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 NPAP1P7-201ENST00000613027 823 ntBASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 MINOS1P3-201ENST00000457048 203 ntBASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC104819.1-201ENST00000504587 486 ntBASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA1Q5Y7H0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA1Q5Y7H0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.58■□□□□ 0.25
HLA-DQA1Q5Y7H0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA1Q5Y7H0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA1Q5Y7H0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA1Q5Y7H0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA1Q5Y7H0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.58■□□□□ 0.24
HLA-DQA1Q5Y7H0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms