Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 AC104819.1-201ENST00000504587 486 ntBASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 AP000867.3-201ENST00000524675 377 ntBASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 AC132938.6-201ENST00000623828 1655 ntBASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 MTCL1P1-201ENST00000446207 792 ntBASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 DUTP2-201ENST00000519164 463 ntBASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC39BQ5VTQ0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 AC022898.2-201ENST00000616822 1312 ntBASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 AL845331.1-201ENST00000424978 1190 ntBASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 NUS1P1-201ENST00000446295 882 ntBASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 KRT17P6-201ENST00000453795 1220 ntBASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 AC074051.2-201ENST00000565115 352 ntBASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 PRELID1P1-202ENST00000567272 903 ntBASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 CLEC4GP1-201ENST00000596555 870 ntBASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC39BQ5VTQ0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TTC39BQ5VTQ0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms