Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC178Q5BJE1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 AC004870.1-201ENST00000315132 882 ntBASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 FAAHP1-202ENST00000446499 1238 ntBASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC178Q5BJE1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 ABCD1P5-201ENST00000445663 754 ntBASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 AC132008.2-207ENST00000454517 770 ntBASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 UNC93B7-201ENST00000509439 705 ntBASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 REXO1L6P-202ENST00000619970 1078 ntBASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC178Q5BJE1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 RBM17P3-201ENST00000417687 1192 ntBASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms