Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 AP000550.4-202ENST00000639755 178 ntBASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 GMCL1P1-201ENST00000463439 1581 ntBASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.02■□□□□ 0.48
KHDC1Q4VXA5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 AC046158.3-201ENST00000624947 2558 ntBASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KHDC1Q4VXA5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 KRT18P48-201ENST00000434763 852 ntBASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 AP003733.1-201ENST00000491725 852 ntBASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 AC011498.5-201ENST00000592027 486 ntBASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 PHGDH-209ENST00000641074 1780 ntBASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 Z83836.1-201ENST00000624605 1642 ntBASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.01■□□□□ 0.47
KHDC1Q4VXA5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18■□□□□ 0.47
KHDC1Q4VXA5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18■□□□□ 0.47
KHDC1Q4VXA5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KHDC1Q4VXA5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 IGHGP-201ENST00000390555 1178 ntBASIC18■□□□□ 0.47
KHDC1Q4VXA5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 AC005332.3-201ENST00000589904 676 ntBASIC18■□□□□ 0.47
KHDC1Q4VXA5 AL390719.2-201ENST00000606993 987 ntBASIC18■□□□□ 0.47
KHDC1Q4VXA5 AC091076.1-201ENST00000610741 619 ntBASIC18■□□□□ 0.47
KHDC1Q4VXA5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18■□□□□ 0.47
KHDC1Q4VXA5 AC093677.2-201ENST00000600169 1863 ntBASIC18■□□□□ 0.47
KHDC1Q4VXA5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18■□□□□ 0.47
KHDC1Q4VXA5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms