Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USH1GQ495M9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
USH1GQ495M9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
USH1GQ495M9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.39■□□□□ 0.86
USH1GQ495M9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
USH1GQ495M9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.39■□□□□ 0.86
USH1GQ495M9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.86
USH1GQ495M9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.39■□□□□ 0.85
USH1GQ495M9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.39■□□□□ 0.85
USH1GQ495M9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 AL031284.1-201ENST00000419297 478 ntBASIC20.39■□□□□ 0.85
USH1GQ495M9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.39■□□□□ 0.85
USH1GQ495M9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.39■□□□□ 0.85
USH1GQ495M9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.39■□□□□ 0.85
USH1GQ495M9 AC018712.1-201ENST00000455767 687 ntBASIC20.39■□□□□ 0.85
USH1GQ495M9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.39■□□□□ 0.85
USH1GQ495M9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.39■□□□□ 0.85
USH1GQ495M9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.39■□□□□ 0.85
USH1GQ495M9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.39■□□□□ 0.85
USH1GQ495M9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USH1GQ495M9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
USH1GQ495M9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USH1GQ495M9 AL356309.3-201ENST00000624132 1934 ntBASIC20.39■□□□□ 0.85
USH1GQ495M9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
USH1GQ495M9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USH1GQ495M9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
USH1GQ495M9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
USH1GQ495M9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
USH1GQ495M9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
USH1GQ495M9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 HNRNPDP1-201ENST00000439535 754 ntBASIC20.38■□□□□ 0.85
USH1GQ495M9 AC122714.2-201ENST00000502787 707 ntBASIC20.38■□□□□ 0.85
USH1GQ495M9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
USH1GQ495M9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 AC021087.4-201ENST00000563761 564 ntBASIC20.38■□□□□ 0.85
USH1GQ495M9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.38■□□□□ 0.85
USH1GQ495M9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.38■□□□□ 0.85
USH1GQ495M9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
USH1GQ495M9 AL049840.3-201ENST00000602669 611 ntBASIC20.38■□□□□ 0.85
USH1GQ495M9 AC120114.3-201ENST00000611923 658 ntBASIC20.38■□□□□ 0.85
USH1GQ495M9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 AP000867.4-201ENST00000641616 219 ntBASIC20.38■□□□□ 0.85
USH1GQ495M9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
USH1GQ495M9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USH1GQ495M9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.37■□□□□ 0.85
USH1GQ495M9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.37■□□□□ 0.85
USH1GQ495M9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.37■□□□□ 0.85
USH1GQ495M9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 COX5BP2-201ENST00000392354 334 ntBASIC20.37■□□□□ 0.85
USH1GQ495M9 AL022342.1-201ENST00000400363 863 ntBASIC20.37■□□□□ 0.85
USH1GQ495M9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.37■□□□□ 0.85
USH1GQ495M9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.37■□□□□ 0.85
USH1GQ495M9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.37■□□□□ 0.85
USH1GQ495M9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.37■□□□□ 0.85
USH1GQ495M9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 BICD1-207ENST00000551848 1962 ntBASIC20.37■□□□□ 0.85
USH1GQ495M9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
USH1GQ495M9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.37■□□□□ 0.85
USH1GQ495M9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.37■□□□□ 0.85
USH1GQ495M9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USH1GQ495M9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.36■□□□□ 0.85
USH1GQ495M9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
USH1GQ495M9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USH1GQ495M9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms