Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM71Q2Q1W2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRIM71Q2Q1W2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 AC109462.3-201ENST00000573934 613 ntBASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 MIR4469-201ENST00000583919 79 ntBASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 AL596442.2-201ENST00000610240 980 ntBASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 AL805961.1-202ENST00000641562 540 ntBASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 AC093677.2-201ENST00000600169 1863 ntBASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 AC100803.2-201ENST00000562459 1963 ntBASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM71Q2Q1W2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 C20orf181-201ENST00000623918 480 ntBASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM71Q2Q1W2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 KRT18P28-201ENST00000453838 1332 ntBASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM71Q2Q1W2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms