Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC092183.1-201ENST00000469884 875 ntBASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.67■□□□□ 0.9
SHROOM1Q2M3G4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 RPSAP43-201ENST00000402237 625 ntBASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 AL020989.1-201ENST00000422979 469 ntBASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 AC108751.1-201ENST00000490852 363 ntBASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 AC004706.3-202ENST00000621574 984 ntBASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SHROOM1Q2M3G4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 GPX1P2-201ENST00000429271 606 ntBASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 AL591424.1-201ENST00000442569 1213 ntBASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 AC136632.2-201ENST00000512891 861 ntBASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 AC064836.3-201ENST00000607928 673 ntBASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHROOM1Q2M3G4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHROOM1Q2M3G4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
SHROOM1Q2M3G4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.64■□□□□ 0.9
SHROOM1Q2M3G4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHROOM1Q2M3G4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SHROOM1Q2M3G4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.64■□□□□ 0.9
SHROOM1Q2M3G4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SHROOM1Q2M3G4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 KLF4P1-201ENST00000412782 1185 ntBASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 AC112482.1-201ENST00000492080 688 ntBASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 AC006557.2-201ENST00000592985 1240 ntBASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 AC090164.3-201ENST00000610780 2143 ntBASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 AL691403.2-201ENST00000618460 490 ntBASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SHROOM1Q2M3G4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.63■□□□□ 0.89
SHROOM1Q2M3G4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.63■□□□□ 0.89
SHROOM1Q2M3G4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.63■□□□□ 0.89
SHROOM1Q2M3G4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHROOM1Q2M3G4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHROOM1Q2M3G4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHROOM1Q2M3G4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.63■□□□□ 0.89
SHROOM1Q2M3G4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms