Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.21■□□□□ 0.34
CACNA1EQ15878 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNA1EQ15878 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNA1EQ15878 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNA1EQ15878 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
CACNA1EQ15878 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 AP002414.1-201ENST00000391405 1147 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 MRPL20P1-201ENST00000400819 433 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 SIGLEC30P-201ENST00000455569 941 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 AC109462.3-201ENST00000573934 613 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 BX276092.7-203ENST00000637198 1536 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 AL096828.2-201ENST00000567259 1965 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CACNA1EQ15878 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 AC068137.2-201ENST00000605408 478 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 AL513210.1-201ENST00000629608 234 ntBASIC17.2■□□□□ 0.34
CACNA1EQ15878 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.2■□□□□ 0.34
CACNA1EQ15878 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 AC005498.2-205ENST00000593218 784 ntBASIC17.19■□□□□ 0.34
CACNA1EQ15878 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 AC003669.1-201ENST00000334569 611 ntBASIC17.19■□□□□ 0.34
CACNA1EQ15878 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 DUTP2-201ENST00000519164 463 ntBASIC17.19■□□□□ 0.34
CACNA1EQ15878 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.19■□□□□ 0.34
CACNA1EQ15878 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CACNA1EQ15878 AC100803.2-201ENST00000562459 1963 ntBASIC17.18■□□□□ 0.34
CACNA1EQ15878 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.18■□□□□ 0.34
CACNA1EQ15878 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CACNA1EQ15878 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 COX5BP2-201ENST00000392354 334 ntBASIC17.18■□□□□ 0.34
CACNA1EQ15878 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.18■□□□□ 0.34
CACNA1EQ15878 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CACNA1EQ15878 HLA-J-203ENST00000494367 1087 ntBASIC17.18■□□□□ 0.34
CACNA1EQ15878 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.18■□□□□ 0.34
CACNA1EQ15878 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.18■□□□□ 0.34
CACNA1EQ15878 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.18■□□□□ 0.34
CACNA1EQ15878 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms