Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.36□□□□□ -0.11
CX3CL1P78423 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.36□□□□□ -0.11
CX3CL1P78423 AP003733.1-201ENST00000491725 852 ntBASIC14.36□□□□□ -0.11
CX3CL1P78423 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.36□□□□□ -0.11
CX3CL1P78423 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 AL590326.2-201ENST00000625139 305 ntBASIC14.36□□□□□ -0.11
CX3CL1P78423 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 PCDHA12-202ENST00000613593 2588 ntBASIC14.36□□□□□ -0.11
CX3CL1P78423 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.36□□□□□ -0.11
CX3CL1P78423 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CL1P78423 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CX3CL1P78423 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CX3CL1P78423 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CX3CL1P78423 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CX3CL1P78423 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CX3CL1P78423 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.35□□□□□ -0.11
CX3CL1P78423 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.35□□□□□ -0.11
CX3CL1P78423 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.35□□□□□ -0.11
CX3CL1P78423 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.35□□□□□ -0.11
CX3CL1P78423 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.35□□□□□ -0.11
CX3CL1P78423 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.35□□□□□ -0.11
CX3CL1P78423 VENTXP5-201ENST00000523979 775 ntBASIC14.35□□□□□ -0.11
CX3CL1P78423 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.35□□□□□ -0.11
CX3CL1P78423 NTF6B-201ENST00000591913 560 ntBASIC14.35□□□□□ -0.11
CX3CL1P78423 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.35□□□□□ -0.11
CX3CL1P78423 AC132938.6-201ENST00000623828 1655 ntBASIC14.35□□□□□ -0.11
CX3CL1P78423 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CX3CL1P78423 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CX3CL1P78423 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CX3CL1P78423 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CL1P78423 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.35□□□□□ -0.11
CX3CL1P78423 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
CX3CL1P78423 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CX3CL1P78423 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.34□□□□□ -0.11
CX3CL1P78423 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CX3CL1P78423 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.34□□□□□ -0.11
CX3CL1P78423 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CL1P78423 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.34□□□□□ -0.11
CX3CL1P78423 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.34□□□□□ -0.11
CX3CL1P78423 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CX3CL1P78423 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms