Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC006116.8-202ENST00000587620 1550 ntBASIC17.98■□□□□ 0.47
PRAMEP78395 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PRAMEP78395 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 LINC01311-201ENST00000565162 1445 ntBASIC17.98■□□□□ 0.47
PRAMEP78395 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.98■□□□□ 0.47
PRAMEP78395 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 OR6D1P-203ENST00000641209 4860 ntBASIC17.97■□□□□ 0.47
PRAMEP78395 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 TSPY12P-201ENST00000421279 868 ntBASIC17.97■□□□□ 0.47
PRAMEP78395 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEP78395 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 AC022616.7-201ENST00000525383 220 ntBASIC17.97■□□□□ 0.47
PRAMEP78395 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PRAMEP78395 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PRAMEP78395 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRAMEP78395 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEP78395 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.97■□□□□ 0.47
PRAMEP78395 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEP78395 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PRAMEP78395 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEP78395 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRAMEP78395 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRAMEP78395 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEP78395 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PRAMEP78395 MIR662-201ENST00000384847 95 ntBASIC17.96■□□□□ 0.47
PRAMEP78395 IGHGP-201ENST00000390555 1178 ntBASIC17.96■□□□□ 0.47
PRAMEP78395 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.96■□□□□ 0.47
PRAMEP78395 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEP78395 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.96■□□□□ 0.47
PRAMEP78395 DUX4L26-201ENST00000489078 1255 ntBASIC17.96■□□□□ 0.47
PRAMEP78395 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.96■□□□□ 0.47
PRAMEP78395 AC116407.2-201ENST00000613639 860 ntBASIC17.96■□□□□ 0.47
PRAMEP78395 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEP78395 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEP78395 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEP78395 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PRAMEP78395 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEP78395 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEP78395 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
PRAMEP78395 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEP78395 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRAMEP78395 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.96■□□□□ 0.46
PRAMEP78395 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEP78395 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEP78395 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEP78395 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEP78395 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEP78395 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEP78395 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEP78395 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEP78395 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PRAMEP78395 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEP78395 VENTXP5-201ENST00000523979 775 ntBASIC17.95■□□□□ 0.46
PRAMEP78395 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEP78395 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEP78395 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEP78395 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEP78395 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEP78395 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEP78395 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.95■□□□□ 0.46
PRAMEP78395 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEP78395 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEP78395 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEP78395 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEP78395 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEP78395 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEP78395 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms