Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 KRT18P21-201ENST00000515767 1272 ntBASIC15.55■□□□□ 0.08
HIST1H3AP68431 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HIST1H3AP68431 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H3AP68431 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 TSPY22P-201ENST00000427496 604 ntBASIC15.54■□□□□ 0.08
HIST1H3AP68431 AC005104.2-201ENST00000427818 678 ntBASIC15.54■□□□□ 0.08
HIST1H3AP68431 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 FAM210CP-201ENST00000445714 574 ntBASIC15.54■□□□□ 0.08
HIST1H3AP68431 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 GUSBP12-201ENST00000513727 720 ntBASIC15.54■□□□□ 0.08
HIST1H3AP68431 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 AC011498.5-201ENST00000592027 486 ntBASIC15.54■□□□□ 0.08
HIST1H3AP68431 AL121956.5-201ENST00000625261 221 ntBASIC15.54■□□□□ 0.08
HIST1H3AP68431 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H3AP68431 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H3AP68431 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.53■□□□□ 0.08
HIST1H3AP68431 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms