Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SKP1P63208 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.9■□□□□ 0.3
SKP1P63208 AC096633.1-201ENST00000422446 749 ntBASIC16.9■□□□□ 0.3
SKP1P63208 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 KRT18P56-201ENST00000507275 550 ntBASIC16.9■□□□□ 0.3
SKP1P63208 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.9■□□□□ 0.3
SKP1P63208 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.9■□□□□ 0.3
SKP1P63208 AL121772.3-201ENST00000610840 674 ntBASIC16.9■□□□□ 0.3
SKP1P63208 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.9■□□□□ 0.3
SKP1P63208 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.9■□□□□ 0.3
SKP1P63208 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SKP1P63208 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 AP000997.3-201ENST00000623333 2250 ntBASIC16.9■□□□□ 0.3
SKP1P63208 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.9■□□□□ 0.3
SKP1P63208 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SKP1P63208 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SKP1P63208 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.89■□□□□ 0.3
SKP1P63208 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
SKP1P63208 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 AC125634.1-201ENST00000438758 1403 ntBASIC16.89■□□□□ 0.29
SKP1P63208 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.89■□□□□ 0.29
SKP1P63208 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.89■□□□□ 0.29
SKP1P63208 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.89■□□□□ 0.29
SKP1P63208 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SKP1P63208 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.89■□□□□ 0.29
SKP1P63208 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.89■□□□□ 0.29
SKP1P63208 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.89■□□□□ 0.29
SKP1P63208 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.89■□□□□ 0.29
SKP1P63208 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.89■□□□□ 0.29
SKP1P63208 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.89■□□□□ 0.29
SKP1P63208 AL138831.2-201ENST00000606564 490 ntBASIC16.89■□□□□ 0.29
SKP1P63208 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SKP1P63208 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.89■□□□□ 0.29
SKP1P63208 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.89■□□□□ 0.29
SKP1P63208 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.89■□□□□ 0.29
SKP1P63208 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 NEFHP1-201ENST00000412845 2629 ntBASIC16.89■□□□□ 0.29
SKP1P63208 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SKP1P63208 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.89■□□□□ 0.29
SKP1P63208 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SKP1P63208 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SKP1P63208 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.88■□□□□ 0.29
SKP1P63208 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.88■□□□□ 0.29
SKP1P63208 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SKP1P63208 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 BX276092.7-203ENST00000637198 1536 ntBASIC16.88■□□□□ 0.29
SKP1P63208 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SKP1P63208 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.88■□□□□ 0.29
SKP1P63208 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.88■□□□□ 0.29
SKP1P63208 AL845331.1-201ENST00000424978 1190 ntBASIC16.88■□□□□ 0.29
SKP1P63208 IGHV3-47-201ENST00000425060 335 ntBASIC16.88■□□□□ 0.29
SKP1P63208 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms