Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNRPFP62306 TP73-AS1-210ENST00000637775 1455 ntBASIC19.32■□□□□ 0.68
SNRPFP62306 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SNRPFP62306 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRPFP62306 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRPFP62306 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRPFP62306 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.32■□□□□ 0.68
SNRPFP62306 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRPFP62306 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRPFP62306 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.31■□□□□ 0.68
SNRPFP62306 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.31■□□□□ 0.68
SNRPFP62306 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SNRPFP62306 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNRPFP62306 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.31■□□□□ 0.68
SNRPFP62306 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SNRPFP62306 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.31■□□□□ 0.68
SNRPFP62306 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.31■□□□□ 0.68
SNRPFP62306 AP000867.3-201ENST00000524675 377 ntBASIC19.31■□□□□ 0.68
SNRPFP62306 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.31■□□□□ 0.68
SNRPFP62306 AC074051.2-201ENST00000565115 352 ntBASIC19.31■□□□□ 0.68
SNRPFP62306 BNIP3P18-201ENST00000593976 575 ntBASIC19.31■□□□□ 0.68
SNRPFP62306 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.31■□□□□ 0.68
SNRPFP62306 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRPFP62306 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.31■□□□□ 0.68
SNRPFP62306 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SNRPFP62306 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.3■□□□□ 0.68
SNRPFP62306 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRPFP62306 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNRPFP62306 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRPFP62306 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNRPFP62306 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 IGHV3-52-201ENST00000519770 353 ntBASIC19.3■□□□□ 0.68
SNRPFP62306 AC019129.2-201ENST00000609837 1235 ntBASIC19.3■□□□□ 0.68
SNRPFP62306 AC093458.2-201ENST00000623150 629 ntBASIC19.3■□□□□ 0.68
SNRPFP62306 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.3■□□□□ 0.68
SNRPFP62306 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SNRPFP62306 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPFP62306 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 INTS4P1-201ENST00000438455 1935 ntBASIC19.29■□□□□ 0.68
SNRPFP62306 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.29■□□□□ 0.68
SNRPFP62306 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.29■□□□□ 0.68
SNRPFP62306 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.29■□□□□ 0.68
SNRPFP62306 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.29■□□□□ 0.68
SNRPFP62306 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.29■□□□□ 0.68
SNRPFP62306 AC114341.1-201ENST00000618070 349 ntBASIC19.29■□□□□ 0.68
SNRPFP62306 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.29■□□□□ 0.68
SNRPFP62306 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.29■□□□□ 0.68
SNRPFP62306 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SNRPFP62306 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
SNRPFP62306 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.29■□□□□ 0.68
SNRPFP62306 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.29■□□□□ 0.68
SNRPFP62306 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNRPFP62306 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPFP62306 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SNRPFP62306 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SNRPFP62306 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPFP62306 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPFP62306 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.28■□□□□ 0.68
SNRPFP62306 AL049757.1-201ENST00000616842 1596 ntBASIC19.28■□□□□ 0.68
SNRPFP62306 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.28■□□□□ 0.68
SNRPFP62306 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SNRPFP62306 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPFP62306 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPFP62306 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPFP62306 NUS1P1-201ENST00000446295 882 ntBASIC19.28■□□□□ 0.68
SNRPFP62306 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.28■□□□□ 0.68
SNRPFP62306 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.28■□□□□ 0.68
SNRPFP62306 AC111152.3-201ENST00000569699 673 ntBASIC19.28■□□□□ 0.68
SNRPFP62306 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPFP62306 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms