Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN6P56747 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN6P56747 SIRPAP1-201ENST00000448467 1770 ntBASIC17.02■□□□□ 0.32
CLDN6P56747 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN6P56747 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN6P56747 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 AC120498.9-201ENST00000339021 3867 ntBASIC17.02■□□□□ 0.32
CLDN6P56747 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN6P56747 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN6P56747 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN6P56747 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN6P56747 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN6P56747 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN6P56747 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN6P56747 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLDN6P56747 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN6P56747 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 YBX1P5-201ENST00000509441 847 ntBASIC17.02■□□□□ 0.32
CLDN6P56747 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN6P56747 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CLDN6P56747 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN6P56747 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN6P56747 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CLDN6P56747 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CLDN6P56747 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CLDN6P56747 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CLDN6P56747 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN6P56747 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CLDN6P56747 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLDN6P56747 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
CLDN6P56747 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLDN6P56747 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN6P56747 SPDYE21P-201ENST00000413323 827 ntBASIC17.01■□□□□ 0.31
CLDN6P56747 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN6P56747 CNN2P11-201ENST00000429351 262 ntBASIC17.01■□□□□ 0.31
CLDN6P56747 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN6P56747 AC108073.2-201ENST00000464002 357 ntBASIC17.01■□□□□ 0.31
CLDN6P56747 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN6P56747 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN6P56747 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN6P56747 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN6P56747 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN6P56747 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN6P56747 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN6P56747 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN6P56747 AC004408.2-201ENST00000623613 2777 ntBASIC17■□□□□ 0.31
CLDN6P56747 GPR89P-201ENST00000407924 1495 ntBASIC17■□□□□ 0.31
CLDN6P56747 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17■□□□□ 0.31
CLDN6P56747 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17■□□□□ 0.31
CLDN6P56747 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN6P56747 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN6P56747 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN6P56747 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN6P56747 CALY-203ENST00000368558 825 ntTSL 5 BASIC17■□□□□ 0.31
CLDN6P56747 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms